Projects

1

Publications

47

Awards

0


Biography

Research Overview

The study of macromolecular interactions

The group combines expertise in the functional and structural characterization of protein complexes and is particularly interested in the study of protein–ligand interactions. Proteins of interest to the group include: a) bacterial DNA replication proteins, transcription factors and metabolic enzymes; and b) viral nucleoproteins, replication proteins and integrases.

Development of ultrasensitive immunodiagnostics

This program involves the development of innovative diagnostic platforms. The group’s successes include the development of the TT-lock Immuno-PCR platform and its application for the diagnosis of melioidosis as well as a sensitive assay to detect the presence of the influenza A nucleoprotein and seafood allergy IgE. Currently the group focuses on developing a new rapid test platform technology for Ebola, influenza A/B, SARS-CoV-2, MERS and RSV.

Drug discovery

This program is in full swing and builds on recent successes in the development of innovative high-throughput assays using the principle of high-throughput differential scanning fluorimetry of GFP-tagged proteins. The group is interested in the identification of drug leads and their mechanisms of action. Diseases of particular interest to the group include: multidrug-resistant ESKAPEE infection, melioidosis, tuberculosis, malaria and HIV.

Development of bio- and nanotechnologies

The group has a long-standing interest and track-record in developing innovative sensing technologies based on fluorescence, biomolecular recognition and protein thermal stability.

Expertise

Protein Biochemistry; DNA replication; Protein-ligand interactions; Immuno-PCR diagnostics; Surface Plasmon Resonance; Protein unfolding and aggregation; Drug targets; High-throughput biotechnologies; GFP

Research

Projects

Teaching

Research Advisor Accreditation
Advisor Type

Mentor

Research Advisor Accreditation
Role

Chair; Independent Academic


Taught Modules
2024
[BC3201] BioengineeringCoordinator, Lecturer
2025
2025
[BM2230] DNA to ProteinsCoordinator, Lecturer
2025
Current JCU Research Students
Development of a universal rapid diagnostic test for influenza A, B and SARS-CoV-2
Doctor of Philosophy (Natural and Physical Sciences)
Characterising the Burkholderia pseudomallei replisome for future melioidosis drug discovery
Master of Philosophy (Medical, Molecular and Veterinary Sciences)
Synthesis of GFP-tagged fibrillin-2 to study the pathogenesis of congenital contractural arachnodactyly (CCA)
Master of Philosophy (Medical and Molecular Sciences)
Completed JCU Research Students
Development of a high-throughput HIV-1 integrase drug screening platform
Master of Philosophy (Medical and Molecular Sciences)- 2021
Defining the ancestral replication fork trap in Tus-dependent bacteria
Master of Philosophy (Natural and Physical Sciences)- 2021
Novel targets and strategies in the treatment of liver and oral pharyngeal cancer
Master of Philosophy (Medical and Molecular Sciences)- 2021

Output

Sorenson, Alanna E.; Schaeffer, Patrick M. (2020) High-throughput differential scanning fluorimetry . New York, NY, USA: [Non-Research Book Chapter] ...
Other Publication Open Access ResearchOnline@JCU
Sorenson, Alanna E.; Schaeffer, Patrick M. (2020) Electrophoretic mobility shift assays with GFP-tag. New York, NY, USA: [Non-Research Book Chapter] ...
Other Publication Open Access ResearchOnline@JCU
Schaeffer, Patrick; Dixon, N.E. (2008) Diagnostics in monoplex/multiplex. WIPO, Geneva, Switzerland: [Other] ...
Other Publication Open Access ResearchOnline@JCU
Dixon, Nicholas; Schaeffer, Patrick; Mulcair, Mark (2006) Double-stranded oligonucleotides and uses . WIPO, Geneva, Switzerland: [Other] ...
Other Publication Open Access ResearchOnline@JCU
Mason, Benjamin; Hayward, David C.; Moya, Aurelie; Cooke, Ira; Sorenson, Alanna; Brunner, Ramona; An...
Journal Publication ResearchOnline@JCU
Toft, Casey J.; Stocks, Bradley B.; Schaeffer, Patrick M. (2024) 'Comparison of the analytical sensi. Talanta, 275 . [DOI] ...
Journal Publication Open Access ResearchOnline@JCU
Sorenson, Alanna E.; Schaeffer, Patrick M. (2023) 'Real-Time Temperature Sensing Using a Ratiometric. Biosensors, 13 (3). [DOI] ...
Journal Publication Open Access ResearchOnline@JCU
Toft, Casey J.; Bourquin, Rebecca A.; Sorenson, Alanna E.; Horwood, Paul F.; Druce, Julian; Schaeffe...
Journal Publication Open Access ResearchOnline@JCU
Radford, Holly M.; Toft, Casey J.; Sorenson, Alanna E.; Schaeffer, Patrick M. (2023) 'Inhibition of . Internationa, 24 (10). ...
Journal Publication Open Access ResearchOnline@JCU
Toft, Casey J.; Sorenson, Alanna E.; Schaeffer, Patrick M. (2022) 'A soft Tus-Ter interaction is hid. Microbiological Research, 263 . [DOI] ...
Journal Publication Open Access ResearchOnline@JCU
Toft, Casey J.; Sorenson, Alanna E.; Schaeffer, Patrick M. (2022) 'Rise of the terminator protein tu. Analytica Chimica Acta, 1213 . [DOI] ...
Journal Publication Open Access ResearchOnline@JCU
Toft, Casey; Moreau, Morgane J.J.; Perutka, Jiri; Mandapati, Savitri; Enyeart, Peter; Sorenson, Alan...
Journal Publication Open Access ResearchOnline@JCU
Sorenson, A.E.; Schaeffer, P.M. (2020) 'A new bivalent fluorescent fusion protein for differential C. Analytica Chimica Acta, 1101 :120-128. [DOI] ...
Journal Publication ResearchOnline@JCU
Johnston, Elecia B.; Kamath, Sandip D.; Iyer, Swati P.; Pratap, Kunal; Karnaneedi, Shaymaviswanathan...
Journal Publication ResearchOnline@JCU
Razaghi, Ali; Heimann, Kirsten; Schaeffer, Patrick M.; Gibson, Spencer B. (2018) 'Negative regulator. Apoptosis, 23 (2):93-112....
Journal Publication ResearchOnline@JCU
Askin, Samuel; Bond, Thomas E.H.; Sorenson, Alanna E.; Moreau, Morgane J.J.; Antony, Helma; Davis, R...
Journal Publication Open Access ResearchOnline@JCU
Bond, Thomas E.H.; Sorenson, Alanna E.; Schaeffer, Patrick M. (2017) 'Functional characterisation of. Microbiological Research, 199 :40-48. [DOI] ...
Journal Publication ResearchOnline@JCU
Kamath, Sandip; Johnston, Elecia; Iyer, Swati; Schaeffer, Patrick; Koplin, Jennifer; Allen, Katrina;...
Journal Publication ResearchOnline@JCU
Bond, Thomas E.H.; Sorenson, Alanna E.; Schaeffer, Patrick M. (2017) 'A green fluorescent protein-ba. Microbiological Research, 205 :35-39. [DOI] ...
Journal Publication ResearchOnline@JCU
Askin, Samuel P.; Bond, Thomas E.H.; Schaeffer, Patrick M. (2016) 'Green fluorescent protein-based a. Analytical Methods, 8 (2):418-424. [DOI] ...
Journal Publication Open Access ResearchOnline@JCU
Sorenson, Alanna E.; Askin, Samuel P.; Schaeffer, Patrick M. (2015) 'In-gel detection of biotin–prot. Analytical Methods, 7 :2087-2092. [DOI] ...
Journal Publication Open Access ResearchOnline@JCU
Johnston, Elecia B.; Kamath, Sandip D.; Lopata, Andreas L.; Schaeffer, Patrick M. (2014) 'Tus-Ter-lo. Bioanaly, 6 (4):...
Journal Publication ResearchOnline@JCU
Cooper, Alanna; Williams, Natasha L.; Morris, Jodie L.; Norton, Robert E.; Ketheesan, Natkunam; Scha...
Journal Publication ResearchOnline@JCU
Sorenson, Alanna E.; Williams, Natasha L.; Morris, Jodie L.; Ketheesan, Natkunam; Norton, Robert E.;...
Journal Publication ResearchOnline@JCU
Moreau, Morgane J.J.; Schaeffer, Patrick M. (2013) 'Dissecting the salt dependence of the Tus-Ter pr. Molecular BioSystems, 9 (12):3146-3154. [DOI] ...
Journal Publication Open Access ResearchOnline@JCU
Antony, Helma; Schaeffer, Patrick M. (2013) 'A GFP-tagged nucleoprotein-based aggregation assay for . Analyst, 138 (20):6073-6080. [DOI] ...
Journal Publication Open Access ResearchOnline@JCU
Moreau, Morgane J.J.; Schaeffer, Patrick M. (2012) 'Differential Tus–Ter binding and lock formation:. Molecular BioSystems, 8 (10):2783-2791. [DOI] ...
Journal Publication ResearchOnline@JCU
Moreau, Morgane J.J; Schaeffer, Patrick M. (2012) 'A polyplex qPCR-based binding assay for protein–D. Analyst, 137 :4111-4113. [DOI] ...
Journal Publication ResearchOnline@JCU
Morin, Isabelle; Schaeffer, Patrick M. (2012) 'Combining RNA-DNA swapping and quantitative polymeras. Analytical Biochemistry, 420 (2):121-126. [DOI] ...
Journal Publication ResearchOnline@JCU
Askin, Samuel P.; Schaeffer, Patrick M. (2012) 'A universal immuno-PCR platform for comparative and . Analyst, 137 (22):5193-5196. [DOI] ...
Journal Publication ResearchOnline@JCU
Moreau, Morgane J.J.; Morin, Isabelle; Askin, Samuel P.; Cooper, Alanna; Moreland, Nicole J.; Vasude...
Journal Publication ResearchOnline@JCU
Morin, Isabelle; Askin, Samuel P.; Schaeffer, Patrick M. (2011) 'IgG-detection devices for the Tus-T. Analyst, 136 (22):4815-4821. [DOI] ...
Journal Publication ResearchOnline@JCU
Askin, Samuel P.; Morin, Isabelle; Schaeffer, Patrick M. (2011) 'Development of a protease activity . Analytical Biochemistry, 415 (2):126-133. [DOI] ...
Journal Publication ResearchOnline@JCU
Morin, Isabelle; Dixon, Nicholas E.; Schaeffer, Patrick M. (2010) 'Ultrasensitive detection of antib. Molecular BioSystems, 6 (7):1173-1175. [DOI] ...
Journal Publication ResearchOnline@JCU
Moreau, Morgane J.J.; Morin, Isabelle; Schaeffer, Patrick M. (2010) 'Quantitative determination of p. Molecular BioSystems, 6 (7):1285-1292. [DOI] ...
Journal Publication ResearchOnline@JCU
Dahdah, Dahdah B.; Morin, Isabelle; Moreau, Morgane J.J.; Dixon, Nicholas E.; Schaeffer, Patrick M. ...
Journal Publication ResearchOnline@JCU
Schaeffer, Patrick; Dixon, Nicholas (2009) 'Synthesis and applications of covalent protein-DNA conju. Australian Journal of Chemistry, 62 (10):1328-1332. ...
Journal Publication ResearchOnline@JCU
Tanner, Nathan A.; Hamdan, Samir M.; Jergic, Slobodan; Loscha, Karin V.; Schaeffer, Patrick M.; Dixo...
Journal Publication ResearchOnline@JCU
Watt, Stephen J.; Urathamakul, Thitima; Schaeffer, Patrick M.; Williams, Neal K.; Sheil, Margaret M....
Journal Publication ResearchOnline@JCU
Su, Xun-Cheng; Schaeffer, Patrick M.; Loscha, Karin V.; Gan, Pamela H. P.; Dixon, Nicholas E. ; Otti...
Journal Publication ResearchOnline@JCU
Ioannou, Charikleia; Schaeffer, Patrick M.; Dixon, Nicholas E.; Soultanas, Panos (2006) 'Helicase bi. Nucleic A, 34 (18)...
Journal Publication ResearchOnline@JCU
Mulcair, Mark D.; Schaeffer, Patrick M.; Oakley, Aaron J.; Cross, Hannah F.; Neylon, Cameron; Hill, ...
Journal Publication ResearchOnline@JCU
Beck, Jennifer L.; Urathamakul, Thitima; Watt, Stephen J.; Sheil, Margaret M.; Schaeffer, Patrick M....
Journal Publication ResearchOnline@JCU
Graham, Stephen C.; Lilley, Penelope E.; Lee, Mihwa; Schaeffer, Patrick M.; Kralicek, Andrew V.; Dix...
Journal Publication ResearchOnline@JCU
Robinson, Andrew; Wu, Peter S.-C.; Harrop, Stephen J. ; Schaeffer, Patrick M. ; Dosztanyi, Zsuzsanna...
Journal Publication ResearchOnline@JCU
Schaeffer, Patrick M.; Headlam, Madeleine J.; Dixon, Nicholas E. (2005) 'Protein - protein interacti. IUBMB Life, 57 (1):5-12. [DOI] ...
Journal Publication ResearchOnline@JCU
Oakley, Aaron J.; Loscha, Karin V.; Schaeffer, Patrick M.; Liepinsh, Edvards; Pintacuda, Guido; Wilc...
Journal Publication ResearchOnline@JCU