College of Science & Engineering


Takahiro Shimada

Takahiro Shimada

Ben Hirsch

Ben Hirsch

Peter Doll

Peter Doll

Sarah Lawless

Sarah Lawless

Jan Strugnell

Jan Strugnell

Leo Foyle

Leo Foyle

Barron River Bridge Planning Study (Old ID 28979)
Conrad Hoskin - Zoology & Ecology
01 Mar 2023 - 01 Jun 2023
Arup Australia Pty Ltd is working with Qld Department of Transport & Main Roads to assess environmental impacts of upgrading/replacing the Barron River Bridge. Their main concern is the Critically Endangered Kuranda Treefrog, for which I am the expert. The project is to fund me to do range-wide surveys of the species to estimate current population size and the proportion of the population that may be impacted by the bridge. Additionally, my expert advice on how to mitigate impacts. I consider this ‘contract research’ because it funds research I planning to do anyway (i.e., a current range-wide survey), and that data will be used by one of my PhD students.
Tectonic and Geodynamic Controls on Critical Mineral Systems in Proterozoic Australia
This project investigates the tectonic and geodynamic controls on critical mineral systems in Proterozoic Australia. Australia's supergiant sediment-hosted deposits, including Mount Isa, Century, McArthur River, and Olympic Dam, formed in Proterozoic basins during the assembly and breakup of the Nuna supercontinent, yet the conditions that enabled mineralisation at this scale remain poorly understood. These basins are typically interpreted using geodynamic frameworks built for the modern Earth, which assume colder, stronger lithosphere than existed at the time. Using coupled thermo-mechanical and landscape evolution modelling (Underworld and Badlands), the project will test how rift mode under elevated Proterozoic geotherms controls basin architecture, fault spacing, heat flow, and sediment distribution. Coupled thermo-mechanical and landscape evolution models will be tested against field data from Proterozoic terranes in northern Australia,
A Proterozoic Framework for Australia's Critical Mineral Systems
Recent advances in high-performance computing and open-source geodynamic modelling codes now make it possible to simulate the complexity of Proterozoic tectonic processes in three dimensions, capturing how a hotter lithosphere rifts, how basins subside and fill, and how heat and fluids move through the crust over millions of years. This project leverages these technologies to investigate: • RQ1: How does the mode of continental rifting under hot Proterozoic conditions control basin architecture, fault spacing, and subsidence patterns? • RQ2: How do wide rift basins evolve towards narrow rifts, and what are the structural and geomorphological consequences of narrow rift development within already-thinned crust? • RQ3: How is strain partitioned when a wide rift is inverted, and does this explain the structural traps and fluid pathways that characterise world-class Proterozoic ore districts?
Advanced Developmental and Cellular Imaging Platform for Aquatic Reproductive Biotechnology
This project will establish an Advanced Developmental and Cellular Imaging Platform for Tropical Aquatic Organisms at James Cook University. The platform will provide high-resolution time-lapse imaging of eggs, embryos and larvae, enabling quantitative assessment of developmental performance, hatchery outcomes and reproductive interventions across aquaculture and marine species. The system will support current research in aquaculture breeding, reproductive biotechnology, cryopreservation and an Australian Economic Accelerator-funded gene-editing project in barramundi, while providing future fluorescence imaging capability for cellular tracking and germ-cell research. The infrastructure will be operated as a shared resource supporting researchers, HDR students and industry collaborations across JCU.
Advanced Developmental and Cellular Imaging Platform for Aquatic Reproductive Biotechnology
Jarrod Guppy - Marine Biology & Aquaculture
01 Jul 2026 - 01 Jun 2027
This project will establish an Advanced Developmental and Cellular Imaging Platform for Tropical Aquatic Organisms at James Cook University. The platform will provide high-resolution time-lapse imaging of eggs, embryos and larvae, enabling quantitative assessment of developmental performance, hatchery outcomes and reproductive interventions across aquaculture and marine species. The system will support current research in aquaculture breeding, reproductive biotechnology, cryopreservation and an Australian Economic Accelerator-funded gene-editing project in barramundi, while providing future fluorescence imaging capability for cellular tracking and germ-cell research. The infrastructure will be operated as a shared resource supporting researchers, HDR students and industry collaborations across JCU.
Using radiocarbon to measure microbial respiration of charcoal (Old ID 22994)
Michael Bird - Earth & Environmental Sciences
18 Jul 2016 - 17 Jul 2017
Building on previous AINSE funding, this project aims to determine the contribution of indigenous charcoal carbon to CO2 respired from the charcoal after three years environmental exposure on a tropical rainforest soil surface at the Daintree Rainforest Observatory, Cape Tribulation. The results will unequivocally demonstrate the degree to which the microbial carbon pool contains carbon derived from radiocarbon dead charcoal.
Fingerprinting environmentally sustainable ores using neodymium isotopes (Old ID 27841)
The rare earth elements (REE) are a critical resource as the world transitions to an energy system dominated by green energy. However, current extraction methods rely on strong acid leaching, which has the potential to create environmental contamination. Alternative REE extraction methodologies, including phyto‐extraction (using plants) and bacteria induced bioleaching are currently being investigated. This project aims to utilise radiogenic and stable neodymium isotopes to characterise the isotopic fractionations induced during different REE extraction techniques. This isotopic fingerprinting will provide a method to verify more sustainably generated REE concentrates, enabling the Australian REE industry to be positioned as a world leading environmental producer.
Fish tissue proteomics as baseline evaluation for safer cultivated seafood with known allergen profile
Ludwig Lopata - Marine Biology & Aquaculture
20 Nov 2022 - 19 Nov 2023
Cultivated seafood is far less researched than traditional livestock alternatives. We will address this critical knowledge gap through high throughput proteomic analysis of various tissues from different fish species, used for cultivation, with a focus on comparative composition of allergenic proteins (allergens), and directly compare with cultivated meat. Closing this lack of industry-wide target product, protein, and allergen profiles is essential for success in the alternative protein field and will promote regulation of safe cultivated foods.
Satellite Based Water Analysis and Drought Planning in Northwest Qld
Ben Jarihani - Earth & Environmental Sciences
01 Aug 2023 - 23 Apr 2025
This project will utilize satellite imagery to map and monitor small water bodies and farm dams to improve grazing land management. The project aims to extract time series of water areas from the satellite images, perform time series analysis to assess the shrinkage or expansion of the water bodies, water levels, and determine their precise locations. The focus is on understanding the availability and dynamics of these water resources, which are vital for livestock, domestic use and wildlife habitats. This project will be a partnership between SGNRM and JCU.
Northern Australia Plant Biosecurity Facility
Lucas Cernusak - Zoology & Ecology
01 Jan 2024 - 30 Jun 2025
This proposal aims to establish the only Australian plant quarantine facility north of the 27th parallel (Brisbane), and therefore the only one in the Australian tropics. The facility will enable effective research on tropical invasive plants, which currently can only be developed via proxy facilities far from the relevant habitats. This poses severe limitations to biosecurity research in the Australian Tropics. JCU is a leading institution in tropical environmental research, and as a broad and diverse base of biosecurity researchers that will be expand their capacity to develop world class research on plant biosecurity under safe and adequate conditions. Research ranges from the impact of reintroduction of new genotypes on weed fitness, genetic variability and sensitivity, impact of climate change on weed expansion, the role of plant-animal interactions on plant control, and others.
Reseracher: Gemma Galbraith (AIMS@JCU Postdoctoral Research Fellow, Reef Connectivity)
Start Date: 10 Nov 2024
Reseracher: Gemma Galbraith (AIMS@JCU Postdoctoral Research Fellow, Reef Connectivity)
Start Date: 31 Mar 2025
Title: Bengali
Reseracher: Khandakar Faisal Ibn Murad (Doctor of Philosophy (Engineering and Related Technologies))
Title: English
Reseracher: Khandakar Faisal Ibn Murad (Doctor of Philosophy (Engineering and Related Technologies))
Reseracher: Nathan Waltham (Associate Professor, Blue Carbon)
Start Date: 01 Jan 2024
Start Date: 01 Jan 2014
Reseracher: Simon Das (Research Fellow - Grouper Nutrition)
Start Date: 01 Jan 2024
End Date: 01 Jan 2027
Reseracher: Megan Higgie (Associate Professor)
Start Date: 01 Jan 2003
Reseracher: Alana Grech (Professor)
End Date: 01 Jan 2010