Marine Biology & Aquaculture


Tom Lloyd

Tom Lloyd

Alys Young

Alys Young

William Arlidge

William Arlidge

Anna Wilson
Kelly Condon

Kelly Condon

Takahiro Shimada

Takahiro Shimada

Peter Doll

Peter Doll

Circulating human papillomavirus (HPV) DNA for surveillance of HPV-related oropharyngeal squamous cell carcinoma (HPV-OPSCC)
Ludwig Lopata - Marine Biology & Aquaculture
16 May 2025 - 31 Jul 2026
We propose implementing a capture-based next-generation sequencing approach for human papillomavirus (HPV) DNA detection at Townsville Hospital and Health Service and assess the feasibility, diagnostic yield, and cost compared to other established circulating HPV detection methods.
Understanding the impact of magnetic resonance impacts on immune regulatory factor secretion from brain tumour cells during radiotherapy
Ludwig Lopata - Marine Biology & Aquaculture
22 May 2025 - 31 Dec 2026
Our study aims to assess how magnetic resonance impacts on immune regulatory factor secretion from brain tumour cells during radiotherapy. This will be performed with an experimental study utilizing relevant therapeutic radiotherapy doses for patients with GBM and undergo rigorous quality assurance to ensure scientific accuracy.
SeaToMeat - Optimizing Seaweed Proteins to Cultivate Meat
Ludwig Lopata - Marine Biology & Aquaculture
14 Feb 2025 - 13 Feb 2027
The SeaToMeat (Optimizing Seaweed Proteins to Cultivated Meat) project aims to tackle challenges of the growing cultivated meat industry by generating lower-cost, high-performance hydrolysates for cell culture media. In this innovative initiative seaweed proteins are converted into high-value hydrolysates, supporting circular economy principles. In collaboration with research institutions such as the Singapore Institute of Technology, James Cook University in Singapore and Australia, and industry partner Umami Bioworks, the project employs advanced technologies to optimize hydrolysis of seaweed protein from sustainable farms in Indonesia and Australia. This process produces hydrolysates optimized for cultivated meat, providing a scalable, cost-effective, and serum-free culture media solution – a critical need for the sector. Focusing on scalability and replicability, SeaToMeat is poised for significant regional and global impact, addressing market demand for cultivated meat production. The project fosters collaboration between industry stakeholders and research institutions, driving towards the common goal of achieving cost-effective cultivated meat.
SeaToMeat - Optimizing Seaweed Proteins to Cultivate Meat
Mark Cyrus - Marine Biology & Aquaculture
14 Feb 2025 - 13 Feb 2027
The SeaToMeat (Optimizing Seaweed Proteins to Cultivated Meat) project aims to tackle challenges of the growing cultivated meat industry by generating lower-cost, high-performance hydrolysates for cell culture media. In this innovative initiative seaweed proteins are converted into high-value hydrolysates, supporting circular economy principles. In collaboration with research institutions such as the Singapore Institute of Technology, James Cook University in Singapore and Australia, and industry partner Umami Bioworks, the project employs advanced technologies to optimize hydrolysis of seaweed protein from sustainable farms in Indonesia and Australia. This process produces hydrolysates optimized for cultivated meat, providing a scalable, cost-effective, and serum-free culture media solution – a critical need for the sector. Focusing on scalability and replicability, SeaToMeat is poised for significant regional and global impact, addressing market demand for cultivated meat production. The project fosters collaboration between industry stakeholders and research institutions, driving towards the common goal of achieving cost-effective cultivated meat.
Rebuilding with Nature - Japan
Nathan Waltham - Marine Biology & Aquaculture
30 Sep 2025 - 30 Sep 2026
Rebuilding with Nature is a company in Japan looking to partner with JCU to explore research capabilities and areas in the marine and coastal ecosystem space. The Non-Disclosure Agreement will commence discussions and to explore research opportunities.
Rebuilding with Nature - Japan
Nathan Waltham - Marine Biology & Aquaculture
30 Sep 2025 - 30 Sep 2026
Rebuilding with Nature is a company in Japan looking to partner with JCU to explore research capabilities and areas in the marine and coastal ecosystem space. The Non-Disclosure Agreement will commence discussions and to explore research opportunities.
Study of circulating human papillomavirus (HPV) DNA in HPV-related oropharyngeal squamous cell carcinoma (HPV-OPSCC)
Ludwig Lopata - Marine Biology & Aquaculture
07 Oct 2025 - 07 Oct 2026
Background: HPV is an established cause of the majority of oropharyngeal cancer cases in Australia, with incidence rates continuing to rise. Despite its favourable prognosis with current treatments, post-treatment surveillance for HPV-OPSCC remains challenging, requiring frequent visits to tertiary hospitals for clinical assessments and imaging. This imposes a significant burden on patients in terms of time and cost, as well as on the healthcare system. Models suggest that incorporating circulating tumour biomarkers into surveillance protocols offers a more cost-effective alternative while maintaining clinical efficacy. The detection of HPV DNA in the blood (circulating HPV DNA, or cHPV-DNA) has shown promise as a non-invasive biomarker that can reliably identify disease recurrence before clinical symptoms or imaging abnormalities arise [2]. This early detection has the potential to enable timely salvage treatments, improving survival rates and reducing treatment-associated morbidity. This research also explores the integration of cHPV-DNA testing into current surveillance frameworks, with the goal of reducing patient visits and reliance on resource-intensive imaging. Additionally, the project has the potential to contribute to the development of personalized, response-adapted treatment strategies for HPV-OPSCC, by identifying patients at higher risk of recurrence or those who may benefit from de-escalated therapy.
Dating West Antarctic ice sheet collapse using molecular sequence data (Old ID 24850)
Jan Strugnell - Marine Biology & Aquaculture
01 Jan 2019 - 31 Dec 2022
This project aims to investigate the past stability and configuration of the West Antarctic Ice Sheet by examining genomic signatures in present day bottom-dwelling Antarctic marine animals. By employing this novel biological approach to address a key question for physical scientists, this project will provide an independent test of the hypothesis that the West Antarctic Ice Sheet collapsed during the most recent interglacial and formed a transAntarctic seaway. Expected project outcomes include increased resolution of the most recent collapse of the West Antarctic Ice Sheet. This should provide significant benefits in predicting future collapse and its impact on sea level rise which is a key uncertainty resulting from climate change.
Testing established methods of early prediction of genetic merit in abalone broodstock (Old ID 24872)
Jan Strugnell - Marine Biology & Aquaculture
04 Jun 2018 - 31 Dec 2020
There is a need in the abalone industry to improve production animals. However, abalone are relatively slow growing animals and take several years to reach harvest size. This means that during the establishment of foundation broodstock populations it may be several years before the relative genetic merit of each of the broodstock can be determined and the first selection decisions made. Researchers at JCU have addressed this time-lag problem of obtaining accurate genetic estimated breeding values (gEBV) in other species. They have shown that broodstock gEBV can be estimated accurately from larvae as early as 18 days through the targeting of growth processes at the cellular level that predict genetic-determined long-term growth. This method is as yet untested in abalone, but if successful, has great potential in helping screen broodstock. This project will test the efficacy of this early prediction method in abalone. The impact of this early detection method would be to save costs by assisting in the selection of superior broodstock individuals which would produce faster growing offspring. Currently new broodstock animals are unevaluated with regard to their genetic merit.
Method Development Support Initiative: Feral Ungulate Management
Nathan Waltham - Marine Biology & Aquaculture
28 Mar 2025 - 30 Jun 2026
A research contract for Method Development Support Initiative: Feral Ungulate Management with a focus on assisting in the development of an initial draft method, including spatial and aquatic indicators and remote sensing methods, followed by stakeholder workshops and fieldwork verification.
Reseracher: Gemma Galbraith (AIMS@JCU Postdoctoral Research Fellow, Reef Connectivity)
Start Date: 10 Nov 2024
Reseracher: Gemma Galbraith (AIMS@JCU Postdoctoral Research Fellow, Reef Connectivity)
Start Date: 31 Mar 2025
Reseracher: Nathan Waltham (Associate Professor, Blue Carbon)
Start Date: 01 Jan 2024
Reseracher: Simon Das (Research Fellow - Grouper Nutrition)
Start Date: 01 Jan 2024
End Date: 01 Jan 2027
Reseracher: Morgan Pratchett (Professor, Marine Biology & Aquaculture)
Reseracher: Morgan Pratchett (Professor, Marine Biology & Aquaculture)
Reseracher: Mark Cyrus (Senior Lecturer Aquaculture Macroalgae)
Start Date: 01 Jan 2004
End Date: 01 Jan 2006
Reseracher: Mark Cyrus (Senior Lecturer Aquaculture Macroalgae)
Start Date: 01 Jan 2007
End Date: 01 Jan 2007
Reseracher: Leo Nankervis (Associate Professor, Aquaculture)
Start Date: 01 Jan 2002
End Date: 01 Jan 2005
Reseracher: Leo Nankervis (Associate Professor, Aquaculture)
Start Date: 01 Jan 1996
End Date: 01 Jan 1999