Marine Biology & Aquaculture
Tom Lloyd
- Postdoctoral Research Fellow, Global Ecosystems
- tom.lloyd@jcu.edu.au
Alys Young
- Postdoctoral Research Fellow, Global Ecosystems
- alys.young@jcu.edu.au
William Arlidge
- Postdoctoral Research Fellow in Community-Based Fisheries Co-Management
- william.arlidge@jcu.edu.au
Anna Wilson
- Senior Research Worker
- anna.wilson@jcu.edu.au
Kelly Condon
- Senior Lecturer, Aquaculture (Aquatic Animal Health)
- kelly.condon@jcu.edu.au
Graeme Cumming
- Adjunct Professor
- graeme.cumming@jcu.edu.au
Takahiro Shimada
- Adjunct Senior Research Fellow
- takahiro.shimada@jcu.edu.au
Peter Doll
- Research Fellow, Coral Reef Health Assessments
- peter.doll@jcu.edu.au
Michela Mitchell
- Casual Research Assistant
- michela.mitchell@jcu.edu.au
Jan Strugnell
- Professor, Promotional Chair
- jan.strugnell@jcu.edu.au
The impact of increasing ocean temperatures on the movement and behaviour of the iconic Indo-Pacific fisheries species, coral trout (Old ID 22898)
Morgan Pratchett
01 Jan 2017 - 30 Sep 2019
Ocean warming is the most pervasive aspect of climate change, which impacts directly on the distribution, abundance, and population structure of fishes, as well as the viability and sustainability of fisheries. Tropical marine fishes are particularly vulnerable to ocean warming, because species are already exposed to summer temperatures that may have negative consequences for individual condition and fitness. Coral trout are among the most important tropical marine fisheries species, targeted by commercial and artisanal fishers throughout the Indo-Pacific. This study will explore if, and how coral trout mediate or acclimate to extreme temperatures, with a view to better understand the impacts of climate change on wild stocks of these important fishes.
Implementing artificial intelligence for the quantitative assessment of abalone in production systems (Old ID 26800)
Phoebe Arbon
01 Apr 2020 - 07 Feb 2022
This project will aim to develop, train, validate and implement an artificial intelligence model to identify and count abalone and measure quantitative abalone traits in production systems from an image. Currently, stock assessment is conducted manually, with large costs associated for the farms. This solution would reduce the cost of stock assessments and would greatly improve data quantity and quality using a “hands-off” approach. The model would also provide an advanced platform for further R & D improvements above and beyond basic assessments (e.g. growth monitoring in feeding trials).
Mungalla Wetland System Repair (Old ID 22784)
Nathan Waltham
01 Oct 2015 - 30 May 2017
Coastal wetlands provide services important for aquatic wildlife. However, human need has contributed to modification and change to coastal wetland function. Government and community projects have commenced across the Great Barrier Reef catchment area to repair and revitalise coastal wetlands to, again, function as productive ecosystems, while still offering services for humans. A project has commenced, supported by Australian Government, to repair natural tidal flow and fisheries value to Mungalla wetland. This project herein will examine wetland aquatic ecology and water quality in response to broader system repair programs underway.
Taxonomic and Functional Diversity of Reef Corals (Old ID 25127)
Tom Bridge
30 Jun 2018 - 31 Dec 2022
Coral reefs are among the most threatened ecosystems on earth, and are strongly affected by comparative small changes in the environment. However, some coral populations have been shown to survive in habitats analogous to those predicted for later this century. This project will quantify how species diversity and their associated ecological traits vary along environmental gradients to understand how functional diversity varies among habitats. This information will enable better predictions of the functional composition of future coral reef ecosystems, and whether plasticity in functional traits may mediate the functional declines of reef ecosystems.
Palm Creen Greening Australia wetlands (Old ID 26406)
Nathan Waltham
01 Nov 2018 - 31 Aug 2019
Coastal wetlands are part of the broader Great Barrier Reef seascape and hold incredible environmental, cultural and economic value. This project will collect water quality and fish data to establish baseline conditions in Palm Creek, prior to coastal restoration works planned by industry partners. The outcomes of this survey and report will be presented to local community and will inform restoration decisions.
Eliminate factors inhibiting redclaw farming from reaching its full potential (Old ID 21754)
Clive Jones
01 Jul 2014 - 31 Dec 2018
The NQCFA have successfully established hatchery technology that enables routine production of third stage juveniles (craylings) for stocking to grow out ponds. Survival of craylings to harvest (9-12 months) is approximately 50%. NQCFA have sought assistance of JCU to address this issue and guide a series of experiments to answer key questions. The research aims to identify causes of mortality, determine when it occurs, and to develop strategies to minimise it.
Probiotic Egg Allergen Immunotherapy for Treatment of Egg Allergy (Old ID 26604)
Ludwig Lopata
01 Jan 2018 - 12 Dec 2021
Eight percent of children have a food allergy and prevalence is increasing. There is no cure so management requires food avoidance which is difficult to achieve. Accidental ingestion of allergen is common, and can result in life-threatening anaphylaxis of death. A curative treatment is vital to improve management. We recently developed a novel treatment of peanut allergy that resulted in the best response rates yet reported for any therapy in development - a combination treatment comprising Probiotics and Peanut Oral Immunotherapy (PPOIT). It is now essential to conduct a larger trial to enhance the study design and confirm these findings in order to progres this treatment to practice, which is the focus of this research.
Biosecurity in northern Australian prawn aquaculture (Old ID 25021)
Dean Jerry
01 Jul 2018 - 30 Jun 2020
This project addresses biosecurity risk through conducting the first comprehensive and widespread biosecurity audit of Australian prawn farms. This project has two components. The first is to conduct a biosecurity metanalysis using traditional and molecular diagnostic tools to establish what pathogens currently occur on prawn farms and how they relate to productivity. Secondly, once the pathobiome is established the project will formulate a risk management strategy for industry and provide on-farm biosecurity training. Understanding the risk of disease, and increased capacity to detect and monitor on-farm, will lead to more effective management practices for northern Australian prawn aquaculture.
On the evolutionary rescue of Antarctic marine fauna – did the IPCC AR6 get it right? (Old ID 29003)
Sally Lau
22 May 2023 - 22 May 2025
The Intergovernmental Panel on Climate Change Sixth Assessment Report (IPCC-AR6) proposed Southern Ocean biodiversity to be rescued under designated refugia with assisted migration. These arbitrary refugia are defined by areas south of 70°S in West Antarctica, and Prydz Bay in East Antarctica. The decisions should instead be informed via species’ current genetic fitness across the Southern Ocean, a direct measure of extinction risk and success potential for assisted migration. By quantifying genetic fitness, this project 1) demonstrates whether IPCC-AR6’s conservation proposal accelerates species extinction, and 2) establishes genetic-informed refugia and translocation pathways that ensures animal evolutionary resilience under climate change.
Invasive Fish in Aquatic Habitats, Torres Strait Island (Old ID 21581)
Nathan Waltham
01 May 2014 - 10 Dec 2016
This project will assess and evaluate movement of invasive freshwater fish species from PNG to Torres Strait Islands. This project aims to understand the mechanisms of this migration (people, or environmental), and will examine ways to reduce the risk of pest freshwater fish species reaching northern Australian waters. A large component of this project is to prepare education material (websites, brochures) and conduct a range of workshops with Rangers community and schools. The success of this project is through a combination of scientific surveys and education.
Start Date:
10 Nov 2024
Start Date:
31 Mar 2025
Start Date:
01 Jan 2024
Start Date:
01 Jan 2024
End Date:
01 Jan 2027
Start Date:
01 Jan 2004
End Date:
01 Jan 2006
Start Date:
01 Jan 2007
End Date:
01 Jan 2007
Title:
PhD, James Cook University
Start Date:
01 Jan 2002
End Date:
01 Jan 2005
Start Date:
01 Jan 1996
End Date:
01 Jan 1999
