Publications

Filters for Publications
Year
Type
Systems medicine
2016
Schmitz, Ulf; Wolkenhauer, Olaf (2016) Systems medicine. New York, USA: [Edited Publication] [DOI]
Other Publication ResearchOnline@JCU
TRAPLINE: A standardized and automated pipeline for RNA sequencing data analysis, evaluation and annotation
2016
Wolfien, Markus; Rimmbach, Christian; Schmitz, Ulf; Jung, Julia Jeannine; Krebs, Stefan; Steinhoff, Gustav; David, Robert; Wolkenhauer, Olaf (2016) 'TRAPLINE: A standardized and automated pipeline for RNA sequencing data analysis, evaluation and annotation'. BMC Bioinformatics, 17 . [DOI]
Journal Publication Open Access ResearchOnline@JCU
The RNA world in the 21st century-a systems approach to finding non-coding keys to clinical questions
2016
Schmitz, Ulf; Naderi-Meshkin, Hojjat; Gupta, Shailendra K.; Wolkenhauer, Olaf; Vera, Julio (2016) 'The RNA world in the 21st century-a systems approach to finding non-coding keys to clinical questions'. Briefings in Bioinformatics, 17 (3):380-392. [DOI]
Journal Publication ResearchOnline@JCU
MicroRNA-mRNA interactions in colorectal cancer and their role in tumor progression
2015
Amirkhah, Raheleh; Schmitz, Ulf; Linnebacher, Michael; Wolkenhauer, Olaf; Farazmand, Ali (2015) 'MicroRNA-mRNA interactions in colorectal cancer and their role in tumor progression'. Genes, Chromosomes and Cancer, 54 (3):129-141. [DOI]
Journal Publication ResearchOnline@JCU
Naïve Bayes classifier predicts functional microRNA target interactions in colorectal cancer
2015
Amirkhah, Raheleh; Farazmand, Ali; Gupta, Shailendra K.; Ahmadi, Hamed; Wolkenhauer, Olaf; Schmitz, Ulf (2015) 'Naïve Bayes classifier predicts functional microRNA target interactions in colorectal cancer'. Molecular BioSystems, 11 :2126-2134.
Journal Publication Open Access ResearchOnline@JCU
The role of microRNAs in the resistance to colorectal cancer treatments
2015
Amirkhah, R.; Farazmand, A.; Irfan-Maqsood, M.; Wolkenhauer, O.; Schmitz, U. (2015) 'The role of microRNAs in the resistance to colorectal cancer treatments'. Cellular and Molecular Biology, 61 (6):17-23. [DOI]
Journal Publication ResearchOnline@JCU
Cooperative gene regulation by microRNA pairs and their identification using a computational workflow
2014
Schmitz, Ulf; Lai, Xin; Winter, Felix; Wolkenhauer, Olaf; Vera, Julio; Gupta, Shailendra (2014) 'Cooperative gene regulation by microRNA pairs and their identification using a computational workflow'. Nucleic Acids Research, 42 (12):7539-7552. [DOI]
Journal Publication Open Access ResearchOnline@JCU
Hybrid modeling of the crosstalk between signaling and transcriptional networks using ordinary differential equations and multi-valued logic
2014
Khan, Faiz M.; Schmitz, Ulf; Nikolov, Svetoslav; Engelmann, David; Pützer, Brigitte M.; Wolkenhauer, Olaf; Vera, Julio (2014) 'Hybrid modeling of the crosstalk between signaling and transcriptional networks using ordinary differential equations and multi-valued logic'. Biochimica et Biophysica Acta. Protein Structure and Molecular Enzymology, 1844 (1):289-298. [DOI]
Journal Publication ResearchOnline@JCU
2-DE profiling of GDNF overexpression-related proteome changes in differentiating ST14A rat progenitor cells
2007
Hoffrogge, Raimund; Beyer, Susanne; Hübner, Rayk; Mikkat, Stefan; Mix, Eilhard; Scharf, Christian; Schmitz, Ulf; Pauleweit, Stefan; Berth, Matthias; Zubrzycki, Igor Z.; Christoph, Hilmar; Pahnke, Jens; Wolkenhauer, Olaf; Uhrmacher, Adelinde; Völker, Uwe; Rolfs, Arndt (2007) '2-DE profiling of GDNF overexpression-related proteome changes in differentiating ST14A rat progenitor cells'. Proteomics, 7 (1):33-46. [DOI]
Journal Publication ResearchOnline@JCU
Oxytocin alters leukogram composition in Bos indicus cattle exposed to short-duration transportation
2021
Wagner, B.K.; Martin, D.G.; Rudd, D.M.; Parker, A.J. (2021) 'Oxytocin alters leukogram composition in Bos indicus cattle exposed to short-duration transportation'. Animal Production Science, 61 (13):1315-1320. [DOI]
Journal Publication ResearchOnline@JCU