Shaymaviswanathan Karnaneedi

Projects 3
Publications 17
Awards 10

Contact Details

Lecturer Molecular Biologist/ Allergologist

Biography

Dr Shay Karnaneedi is a researcher and lecturer at James Cook University specialising in food allergy, molecular allergology, food safety, proteomics and protein science. Based within JCU’s Molecular Allergy Research Laboratory, his research focuses on fish, shellfish, edible insects and other emerging food sources.

He integrates proteomics, immunology, molecular biology and bioinformatics to identify and characterise allergens, investigate cross-reactivity, and determine how species, processing and product composition influence allergen abundance and exposure. His work supports improved allergen risk assessment, food manufacturing, diagnostic approaches and the safety evaluation of sustainable and alternative proteins.

Beyond food allergy, Dr Karnaneedi contributes to a multidisciplinary project investigating protein biomarkers for human papillomavirus-associated oropharyngeal squamous cell carcinoma, with the aim of improving diagnosis, treatment monitoring and early detection of cancer recurrence.

Dr Karnaneedi completed his PhD cum laude and has received competitive funding and recognition, including an NHMRC Centre for Food and Allergy Research Postdoctoral Grant, an Australian Institute of Food Science and Technology Early Career Research Grant, and the APAAACI Young Scientist Award. His research involves national and international collaborations with clinical, government, academic and industry partners, including the National Measurement Institute, CSIRO, the National Allergy Centre of Excellence, Bio21 Institute, A*STAR Singapore and IPB University.

Alongside his research, he is passionate about teaching and mentoring, contributing to undergraduate molecular and cellular biology education and supervising students across food allergy, food proteomics, emerging food safety and biomarker discovery.

Research

Projects

Teaching

Taught Modules

Current JCU Research Students

Towards safer Seafood: Advancing Fish Allergy Diagnosis, Management and Risk Mitigation through Immunoproteomics
Doctor of Philosophy (Health)
Allergen profiles in Asian and American prawns for the development of improved diagnosis and immunotherapy
Doctor of Philosophy (Medical, Molecular and Veterinary Sciences)
Profiling and identifying clinically cross-reactive allergens in shellfish and dust mite-sensitised patients.
Doctor of Philosophy (Medical, Molecular and Veterinary Sciences)

Activities

Education

Associations

Awards

Committees

Output

Karnaneedi, Shaymaviswanathan; Limviphuvadh, Vachiranee; Maurer-Stroh, Sebastian; Lopata, Andreas L. (2024) De Novo Transcriptomic Analyses to Identify and Compare Allergens in Foods. New York, NY, USA: [Non-Research Book Chapter] [DOI]
Other Publication ResearchOnline@JCU
Heidari, Sahel; Ruethers, Thimo; Karnaneedi, Shaymaviswanathan; Yin, Lydia Wong Su; Lopata, Andreas (2025) 'Advances in Shellfish Allergy Therapy: From Current Approaches to Future Strategies'. Clinical Reviews in Allergy & Immunology, 68 . [DOI]
Journal Publication Open Access ResearchOnline@JCU
Jerry, Emily M.; Karnaneedi, Shaymaviswanathan; Ruethers, Thimo; Jerry, Dean R.; Condon, Kelly; Lopata, Andreas L. (2024) 'Allergen Diversity and Abundance in Different Tissues of the Redclaw Crayfish (Cherax quadricarinatus)'. Foods, 13 (2). [DOI]
Journal Publication Open Access ResearchOnline@JCU
Karnaneedi, Shaymaviswanathan; Johnston, Elecia B.; Bose, Utpal; Juhász, Angéla; Broadbent, James A.; Ruethers, Thimo; Jerry, Emily M.; Kamath, Sandip D.; Limviphuvadh, Vachiranee; Stockwell, Sally; Byrne, Keren; Clarke, Dean; Colgrave, Michelle L.; Maurer-Stroh, Sebastian; Lopata, Andreas L. (2024) 'The Allergen Profile of Two Edible Insect Species—Acheta domesticus and Hermetia illucens'. Molecular Nutrition & Food Research, 68 (16). [DOI]
Journal Publication Open Access ResearchOnline@JCU
Dorney, Ryley D.; Johnston, Elecia B.; Karnaneedi, Shaymaviswanathan; Ruethers, Thimo; Kamath, Sandip D.; Gopi, Karthik; Mazumder, Debashish; Sammut, Jesmond; Jerry, Dean; Williamson, Nicholas A.; Nie, Shuai; Lopata, Andreas L. (2024) 'Variation in Shrimp Allergens: Place of Origin Effects on Food Safety Assessment'. International Journal of Molecular Sciences, 25 . [DOI]
Journal Publication Open Access ResearchOnline@JCU
Taki, Aya C.; Ruethers, Thimo; Nugraha, Roni; Karnaneedi, Shaymaviswanathan; Williamson, Nicholas; Nie, Shuai; Leeming, Michael G.; Mehr, Sam S.; Campbell, Dianne E.; Lopata, Andreas L. (2023) 'Thermostable allergens in canned fish: Evaluating risks for fish allergy'. Allergy: European Journal of Allergy and Clinical Immunology, 78 (12):3221-3234. [DOI]
Journal Publication Open Access ResearchOnline@JCU
Ruethers, Thimo; Johnston, Elecia B.; Karnaneedi, Shaymaviswanathan; Nie, Shuai; Nugraha, Roni; Taki, Aya C.; Kamath, Sandip D.; Williamson, Nicholas A.; Mehr, Sam S.; Campbell, Dianne E.; Lopata, Andreas L. (2023) 'Commercial shellfish skin prick test extracts show critical variability in allergen repertoire'. Allergy, 78 (2):3261-3265. [DOI]
Journal Publication Open Access ResearchOnline@JCU
Ruethers, Thimo; Nugraha, Roni; Taki, Aya C.; O'Malley, Andrea; Karnaneedi, Shaymaviswanathan; Zhang, Stephanie; Kapingidza, A. Brenda; Mehr, Sam; Kamath, Sandip D.; Chruszcz, Maksymilian; Mackay, Graham; Campbell, Dianne E.; Lopata, Andreas L. (2022) 'The first reptilian allergen and major allergen for fish-allergic patients: Crocodile β-parvalbumin'. Pediatric Allergy and Immunology, 33 (5). [DOI]
Journal Publication Open Access ResearchOnline@JCU
Nugraha, Roni; Ruethers, Thimo; Taki, Aya C.; Johnston, Elecia B.; Karnaneedi, Shaymaviswanathan; Kamath, Sandip D.; Lopata, Andreas L. (2022) 'Recombinant Tropomyosin from the Pacific Oyster (Crassostrea gigas) for Better Diagnosis'. Foods, 11 (3). [DOI]
Journal Publication Open Access ResearchOnline@JCU
Bose, Utpal; Broadbent, James A.; Juhász, Angéla; Karnaneedi, Shaymaviswanathan; Johnston, Elecia B.; Stockwell, Sally; Byrne, Keren; Limviphuvadh, Vachiranee; Maurer-Stroh, Sebastian; Lopata, Andreas L.; Colgrave, Michelle L. (2022) 'Comparison of protein extraction protocols and allergen mapping from black soldier fly Hermetia illucens'. Journal of Proteomics, 269 . [DOI]
Journal Publication Open Access ResearchOnline@JCU
Ruethers, Thimo; Taki, Aya C.; Karnaneedi, Shaymaviswanathan; Nie, Shuai; Kalic, Tanja; Dai, Danyi; Daduang, Sakda; Leeming, Michael; Williamson, Nicholas A.; Breiteneder, Heimo; Mehr, Sam S.; Kamath, Sandip; Campbell, Dianne E.; Lopata, Andreas (2021) 'Expanding the allergen repertoire of salmon and catfish'. Allergy, 76 (5):1443-1453. [DOI]
Journal Publication Open Access ResearchOnline@JCU
Bose, Utpal; Broadbent, James A.; Juhász, Angéla; Karnaneedi, Shaymaviswanathan; Johnston, Elecia B.; Stockwell, Sally; Byrne, Keren; Limviphuvadh, Vachiranee; Maurer-Stroh, Sebastian; Lopata, Andreas L.; Colgrave, Michelle L. (2021) 'Protein extraction protocols for optimal proteome measurement and arginine kinase quantitation from cricket Acheta domesticus for foodsafety assessment'. Food Chemistry, 348 . [DOI]
Journal Publication Open Access ResearchOnline@JCU
Karnaneedi, Shaymaviswanathan; Huerlimann, Roger; Johnston, Elecia B.; Nugraha, Roni; Ruethers, Thimo; Taki, Aya C.; Kamath, Sandip D.; Wade, Nicholas M.; Jerry, Dean R.; Lopata, Andreas L. (2021) 'Novel allergen discovery through comprehensive de novo transcriptomic analyses of five shrimp species'. International Journal of Molecular Sciences, 22 (1). [DOI]
Journal Publication Open Access ResearchOnline@JCU
Nugraha, Roni; Kamath, Sandip D.; Johnston, Elecia; Karnaneedi, Shaymaviswanathan; Ruethers, Thimo; Lopata, Andreas L. (2019) 'Conservation analysis of B-cell allergen epitopes to predict clinical cross-reactivity between shellfish and inhalant invertebrate allergens'. Frontiers in Immunology, 10 . [DOI]
Journal Publication Open Access ResearchOnline@JCU
Johnston, Elecia B.; Kamath, Sandip D.; Iyer, Swati P.; Pratap, Kunal; Karnaneedi, Shaymaviswanathan; Taki, Aya C.; Nugraha, Roni; Schaeffer, Patrick M.; Rolland, Jennifer M.; O'Hehir, Robyn E.; Lopata, Andreas L. (2019) 'Defining specific allergens for improved component-resolved diagnosis of shrimp allergy in adults'. Molecular Immunology, 112 :330-337. [DOI]
Journal Publication ResearchOnline@JCU
Karnaneedi, Shaymaviswanathan; Anvari, Sara; Brunner, Shea; Tuano, Karen S.; Su, Brenda Bin; Hira, Saachi; Heidari, Sahel; Hira, Diamond; Davis, Carla M.; Lopata, Andreas L. (2025) 'Shrimp Allergy—Distinct Allergen Sensitization Profiles Between Intercontinental Cohorts' Allergy, 80 (10) :2909-2913. [DOI]
Journal Contribution Open Access ResearchOnline@JCU
Anvari, Sara; Brunner, Shea; Tuano, Karen S.; Su, Brenda Bin; Karnaneedi, Shaymaviswanathan; Lopata, Andreas L.; Davis, Carla M. (2022) 'Similar IgE binding patterns in Gulf of Mexico and Southeast Asian shrimp species in US shrimp allergic patients' Allergy, 77 (9) :2825-2829. [DOI]
Journal Contribution Open Access ResearchOnline@JCU